PoplarV1, Main, Exploration, bibRecord, 000657

Transcriptome analysis of transcription factor genes under multiple abiotic stresses in Populus simonii × P.nigra.

Identifieur interne : 000657 ( Main/Exploration ); précédent : 000656; suivant : 000658

Transcriptome analysis of transcription factor genes under multiple abiotic stresses in Populus simonii × P.nigra.

Auteurs : Wenjing Yao [République populaire de Chine] ; Boru Zhou [République populaire de Chine] ; Xuemei Zhang [République populaire de Chine] ; Kai Zhao [République populaire de Chine] ; Zihan Cheng [République populaire de Chine] ; Tingbo Jiang [République populaire de Chine]

Source :

Gene [ 1879-0038 ] ; 2019.

RBID : pubmed:31029602

Descripteurs français

English descriptors

KwdEn :
- Gene Expression Profiling (methods), Gene Expression Regulation, Plant (MeSH), Multigene Family (MeSH), Phylogeny (MeSH), Plant Proteins (genetics), Plants, Genetically Modified (genetics), Populus (genetics), Populus (physiology), Salt Tolerance (MeSH), Sequence Analysis, RNA (methods), Stress, Physiological (MeSH), Transcription Factors (genetics).
MESH :
- chemical , genetics : Plant Proteins, Transcription Factors.
- genetics : Plants, Genetically Modified, Populus.
- methods : Gene Expression Profiling, Sequence Analysis, RNA.
- physiology : Populus.
- Gene Expression Regulation, Plant, Multigene Family, Phylogeny, Salt Tolerance, Stress, Physiological.

Abstract

Transcription factor (TF) genes play essential roles in abiotic stress responses as master switches in complex regulatory networks. In the present study, the transcript abundance of 4287 TF genes in Populus simonii × P.nigra were profiled under NaCl, KCl, CdCl₂ and PEG stresses, respectively. A total of 118 up-regulated and 226 down-regulated TFs were identified to be shared in the four stress conditions. Among the top seven TF families (ERF, NAC, WRKY, MYB, bHLH, C2H2, bZIP), there were 76 up-regulated TFs found common in the four stresses, and 67% of them were likely to be involved in stress responses. We identified three TFs, which can enhance stress tolerance of transgenic plants, were members of the most significantly up-regulated genes in the respective TF family. Among them, a highly salt-inducible ERF gene, ERF76, was proved to activate the expression of other TFs in the transgenic poplar lines overexpressing ERF76. Transcriptome analysis indicated there was a synergistic effect of TFs on improving salinity tolerance of the transgenic plants. Of significant interest in the study is the discovery of the role and interactions of various TF genes under multiple stress conditions.

DOI: 10.1016/j.gene.2019.04.071
PubMed: 31029602

Affiliations:

République populaire de Chine

Links toward previous steps (curation, corpus...)

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Le document en format XML

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<term>Plant Proteins (genetics)</term>
<term>Plants, Genetically Modified (genetics)</term>
<term>Populus (genetics)</term>
<term>Populus (physiology)</term>
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<term>Sequence Analysis, RNA (methods)</term>
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<term>Transcription Factors (genetics)</term>
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<term>Analyse de séquence d'ARN (méthodes)</term>
<term>Facteurs de transcription (génétique)</term>
<term>Famille multigénique (MeSH)</term>
<term>Phylogenèse (MeSH)</term>
<term>Populus (génétique)</term>
<term>Populus (physiologie)</term>
<term>Protéines végétales (génétique)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
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<term>Tolérance au sel (MeSH)</term>
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<front><div type="abstract" xml:lang="en">Transcription factor (TF) genes play essential roles in abiotic stress responses as master switches in complex regulatory networks. In the present study, the transcript abundance of 4287 TF genes in Populus simonii × P.nigra were profiled under NaCl, KCl, CdCl<sub>2</sub>
 and PEG stresses, respectively. A total of 118 up-regulated and 226 down-regulated TFs were identified to be shared in the four stress conditions. Among the top seven TF families (ERF, NAC, WRKY, MYB, bHLH, C2H2, bZIP), there were 76 up-regulated TFs found common in the four stresses, and 67% of them were likely to be involved in stress responses. We identified three TFs, which can enhance stress tolerance of transgenic plants, were members of the most significantly up-regulated genes in the respective TF family. Among them, a highly salt-inducible ERF gene, ERF76, was proved to activate the expression of other TFs in the transgenic poplar lines overexpressing ERF76. Transcriptome analysis indicated there was a synergistic effect of TFs on improving salinity tolerance of the transgenic plants. Of significant interest in the study is the discovery of the role and interactions of various TF genes under multiple stress conditions.</div>
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<Abstract><AbstractText>Transcription factor (TF) genes play essential roles in abiotic stress responses as master switches in complex regulatory networks. In the present study, the transcript abundance of 4287 TF genes in Populus simonii × P.nigra were profiled under NaCl, KCl, CdCl<sub>2</sub>
 and PEG stresses, respectively. A total of 118 up-regulated and 226 down-regulated TFs were identified to be shared in the four stress conditions. Among the top seven TF families (ERF, NAC, WRKY, MYB, bHLH, C2H2, bZIP), there were 76 up-regulated TFs found common in the four stresses, and 67% of them were likely to be involved in stress responses. We identified three TFs, which can enhance stress tolerance of transgenic plants, were members of the most significantly up-regulated genes in the respective TF family. Among them, a highly salt-inducible ERF gene, ERF76, was proved to activate the expression of other TFs in the transgenic poplar lines overexpressing ERF76. Transcriptome analysis indicated there was a synergistic effect of TFs on improving salinity tolerance of the transgenic plants. Of significant interest in the study is the discovery of the role and interactions of various TF genes under multiple stress conditions.</AbstractText>
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<name sortKey="Jiang, Tingbo" sort="Jiang, Tingbo" uniqKey="Jiang T" first="Tingbo" last="Jiang">Tingbo Jiang</name>
<name sortKey="Zhang, Xuemei" sort="Zhang, Xuemei" uniqKey="Zhang X" first="Xuemei" last="Zhang">Xuemei Zhang</name>
<name sortKey="Zhao, Kai" sort="Zhao, Kai" uniqKey="Zhao K" first="Kai" last="Zhao">Kai Zhao</name>
<name sortKey="Zhou, Boru" sort="Zhou, Boru" uniqKey="Zhou B" first="Boru" last="Zhou">Boru Zhou</name>
</country>
</tree>
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   |clé=     pubmed:31029602
   |texte=   Transcriptome analysis of transcription factor genes under multiple abiotic stresses in Populus simonii × P.nigra.
}}

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Transcriptome analysis of transcription factor genes under multiple abiotic stresses in Populus simonii × P.nigra.

Transcriptome analysis of transcription factor genes under multiple abiotic stresses in Populus simonii × P.nigra.

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